Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCTGCCGCGGCTGTGGA
(((((((((((((.((..(((&))))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022362
GeneSymbolMMS19
Binding site41,61
Score1.0
Seed1
Au0.309
Energy-25.0
Binding len20
Me-4.794
Phylopstem0.42969769230769234
Phylopflank0.8208534847972973
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure