Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACTGGCAGCTGCT
..(((((((((((((......&)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022363
GeneSymbolLHX5
Binding site1715,1730
Score0.846
Seed1
Au0.265
Energy-21.2
Binding len15
Me-5.19
Phylopstem5.004575714285714
Phylopflank5.44731141375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure