Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAGCTGTGTGTAGGC
.(((.(((((((.((((((...&))))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_022365
GeneSymbolDNAJC1
Binding site29,48
Score0.846
Seed0
Au0.294
Energy-18.5
Binding len19
Me-9.201
Phylopstem4.570141428571429
Phylopflank1.3132588532546294
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure