Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACTGAGCTGCC
..((((((.(((((((.....&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022368
GeneSymbolPJA1
Binding site1567,1581
Score0.923
Seed1
Au0.441
Energy-19.8
Binding len14
Me-6.013
Phylopstem0.8192661857142856
Phylopflank0.5656817762500002
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure