Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCCCCAGCTGTAT
.((((((((.((((.......&)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022368
GeneSymbolPJA1
Binding site272,286
Score1.0
Seed1
Au0.397
Energy-17.6
Binding len14
Me-6.004
Phylopstem0.34353511249999996
Phylopflank1.3468592250000007
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure