Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTCAGCCGTAGGACAGGAGCAGGCTCCAAGGGGCTGCAGA
(((((((((((((((.(((.(&).))))))))))......................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022369
GeneSymbolSTRA6
Binding site777,820
Score1.0
Seed1
Au0.426
Energy-21.1
Binding len43
Me-4.171
Phylopstem0.9822625989189188
Phylopflank1.1655945112500001
Longest consecutive pairings10
Position of longest consecutive pairings31
Pairings in 3prime end6
PositionCDS
2D Structure