Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTTCCCAGAGGGAGCAGGCCGGAACCACAGGGCCAGA
..((((((((((((((((.((.&)).))))))))).................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330441
GeneSymbolRPS6KA1
Binding site2263,2300
Score0.846
Seed1
Au0.294
Energy-24.4
Binding len37
Me-4.957
Phylopstem0.6928382121212122
Phylopflank0.4745148
Longest consecutive pairings9
Position of longest consecutive pairings25
Pairings in 3prime end6
Position3UTR
2D Structure