Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGATCATCTGCAGCTGA
...(((((((((.((...((.&))...)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022373
GeneSymbolHERPUD2
Binding site822,840
Score0.923
Seed0
Au0.559
Energy-20.7
Binding len18
Me-8.037
Phylopstem0.23366499999999993
Phylopflank2.5050643412500007
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure