Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTAAGGCCATGACCGGCCGAGCTGTGAG
((((((((.((((((((((((&))))))..........)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022405
GeneSymbolSLC6A20
Binding site1480,1511
Score0.846
Seed1
Au0.412
Energy-22.0
Binding len31
Me-4.994
Phylopstem-0.05026768181818175
Phylopflank0.03727476250000003
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure