Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCTGTTTTGTTTAAAATGCTCTTCAAGGCATTGTGAGGCCAGGA
.((((((.((((((((......&.))))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_022437
GeneSymbolABCG8
Binding site5554,5601
Score0.923
Seed1
Au0.529
Energy-21.8
Binding len18
Me-6.107
Phylopstem0.49299233750000004
Phylopflank0.02823627549999999
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end2
Position3UTR
2D Structure