Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTTTGCTTGGTGCCAGT
..(((((((.(((.((((((((&)))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_022455
GeneSymbolNSD1
Binding site10332,10351
Score0.846
Seed1
Au0.529
Energy-17.6
Binding len19
Me-7.056
Phylopstem2.7892935
Phylopflank1.9668611449999998
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure