Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCTTTGTGTGCTCAGA
..(((((((((((.(((.....&))).)))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_022455
GeneSymbolNSD1
Binding site5324,5341
Score0.846
Seed1
Au0.529
Energy-17.2
Binding len17
Me-5.814
Phylopstem5.289644833333334
Phylopflank5.014973305500002
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end3
PositionCDS
2D Structure