Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTGGGATAGACTCTGAATGCATCAACCGCATGCTGCT
..(((((((((((((......&.)))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022455
GeneSymbolNSD1
Binding site5907,5947
Score0.923
Seed1
Au0.456
Energy-23.5
Binding len16
Me-5.19
Phylopstem4.878510178571429
Phylopflank5.069786256250001
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end2
PositionCDS
2D Structure