Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGTTGCCGCAGCTGA
...((((((((((.....(((&))).....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022455
GeneSymbolNSD1
Binding site4292,4311
Score1.0
Seed0
Au0.412
Energy-22.4
Binding len19
Me-8.34
Phylopstem2.8374747
Phylopflank2.0123379550000005
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure