Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCAGCGGCCGCGGTGGGTT
..((.(((((((((((..(((&)))....)))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022456
GeneSymbolRAB3IP
Binding site143,166
Score0.846
Seed0
Au0.382
Energy-20.9
Binding len23
Me-9.076
Phylopstem0.41081618181818186
Phylopflank1.8123164587499998
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end6
Position5UTR
2D Structure