Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACATCTGCAGCTGACAAT
((((((((((((.((((....&)))).))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022457
GeneSymbolCOP1
Binding site2544,2563
Score1.0
Seed1
Au0.618
Energy-22.4
Binding len19
Me-5.227
Phylopstem0.611451076923077
Phylopflank0.7137270815
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure