Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGAGAACAAATAGATTGTTACAGCCTTGGGCTGCTGCGT
.((((((.((((((((((.(.&.).))))))))....)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022458
GeneSymbolLMBR1
Binding site3702,3745
Score0.846
Seed1
Au0.5
Energy-21.5
Binding len25
Me-6.107
Phylopstem0.3605714285714285
Phylopflank0.29100000000000004
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure