Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCACTCGCCAATCAAGTCTTGAGCTGGAAC
((.(((((((((.((((((((&)))))))).)))).............))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022459
GeneSymbolXPO4
Binding site684,719
Score1.0
Seed0
Au0.544
Energy-21.2
Binding len35
Me-6.784
Phylopstem0.16961722272727267
Phylopflank-0.027216234999999978
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end8
PositionCDS
2D Structure