Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACTGCGGCTGGCGAA
(((((((((((((.((.....&)).)))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022459
GeneSymbolXPO4
Binding site3218,3236
Score1.0
Seed1
Au0.485
Energy-19.9
Binding len18
Me-4.794
Phylopstem0.6536220142857143
Phylopflank0.6271608262500001
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end2
PositionCDS
2D Structure