Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGCTCCTCGTGGCTGCC
..((((((((((..(((((((&)))).)))..).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022460
GeneSymbolHS1BP3
Binding site1766,1788
Score0.846
Seed1
Au0.338
Energy-21.6
Binding len22
Me-7.103
Phylopstem-0.13475398190909094
Phylopflank1.0380681261875002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure