Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCATATTGCCAGGTG
((((((((....((((((((..&))))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_022462
GeneSymbolHIF3A
Binding site5406,5425
Score0.846
Seed1
Au0.397
Energy-22.8
Binding len19
Me-12.408
Phylopstem0.029676525000000085
Phylopflank0.40325175
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure