Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCGCATGCACCGCCTCTGCGCCGCAGCTGGAGC
((.(((((((((.((((((((&.)))).))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022462
GeneSymbolHIF3A
Binding site300,337
Score0.808
Seed0
Au0.426
Energy-27.2
Binding len23
Me-6.784
Phylopstem1.2968424444444446
Phylopflank4.520851771
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end8
PositionCDS
2D Structure