Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGAGGCGGCCAAGCAGCTGA
...(((((((((((((..((.&))...))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022463
GeneSymbolNXN
Binding site1119,1140
Score0.846
Seed0
Au0.441
Energy-22.0
Binding len21
Me-6.515
Phylopstem0.29652816
Phylopflank0.19449303749999994
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure