Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTGCGACCTGGAACAATGCGGCTGG
...((((((((((((((.(((&))).))))))).........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022467
GeneSymbolCHST8
Binding site761,789
Score0.846
Seed0
Au0.397
Energy-22.5
Binding len28
Me-6.515
Phylopstem2.0131753913043475
Phylopflank2.34082794125
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure