Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCGCCGCCGCTGCC
..(((((.(((((.((..(((&))))).))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022467
GeneSymbolCHST8
Binding site22,40
Score0.923
Seed0
Au0.412
Energy-22.1
Binding len18
Me-8.127
Phylopstem-0.0850756
Phylopflank1.9358120648611115
Longest consecutive pairings5
Position of longest consecutive pairings13
Pairings in 3prime end5
Position5UTR
2D Structure