Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTTTGCCGTGGCTGTC
..(((((((((((....((((&))))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022468
GeneSymbolMMP25
Binding site1033,1053
Score0.923
Seed1
Au0.338
Energy-23.5
Binding len20
Me-6.782
Phylopstem2.1764244818181817
Phylopflank2.3286292875
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure