Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGACACTGCAGCA
.....(((((((.(((..(((&)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022474
GeneSymbolPALS1
Binding site2425,2441
Score0.846
Seed0
Au0.5
Energy-18.9
Binding len16
Me-14.955
Phylopstem0.014274757142857102
Phylopflank0.5285804300000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure