Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTAAGCTGCTGCTGCT
..(((((.((((((..((((.&))))..)))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022475
GeneSymbolHHIP
Binding site536,555
Score0.923
Seed0
Au0.441
Energy-23.7
Binding len19
Me-8.239
Phylopstem3.9111116666666668
Phylopflank3.1064249862500004
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure