Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCCCAGCCGCAGCA
.....((((((((((..((((&))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022475
GeneSymbolHHIP
Binding site218,235
Score0.846
Seed0
Au0.397
Energy-22.3
Binding len17
Me-13.899
Phylopstem0.8215011699999998
Phylopflank0.78921745875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure