Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCTATGTTGCCCAGGCTGCAGA
((((((((..(((.(((((((&)))))))......)))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022475
GeneSymbolHHIP
Binding site6074,6101
Score0.846
Seed1
Au0.471
Energy-22.3
Binding len27
Me-7.093
Phylopstem-0.0857805875
Phylopflank-0.07503659249999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure