Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGAGGCTGCAGTACTGTAT
.(((((((((((((....(((&)))....))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022476
GeneSymbolAKTIP
Binding site716,739
Score0.923
Seed1
Au0.588
Energy-18.2
Binding len23
Me-4.762
Phylopstem1.3289915006666666
Phylopflank1.9517493125
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure