Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCGGCGGCAGAAGCAAG
((((..((((.((((((.(((&))).)))))).))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022478
GeneSymbolCDH24
Binding site2222,2244
Score0.846
Seed0
Au0.382
Energy-23.2
Binding len22
Me-12.782
Phylopstem3.706440816666667
Phylopflank2.81642489125
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure