Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATTACTTTCCCACAAGTGATGATAGTTAATATAATGTATGCCAGA
..((((((((((.((((.....&.)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_022484
GeneSymbolTMEM168
Binding site5984,6034
Score0.923
Seed1
Au0.735
Energy-19.2
Binding len17
Me-6.246
Phylopstem4.669559
Phylopflank4.890782635
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure