Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCACCGGATCCATGTGGATGGGAGCAGCGGGCGGCTGCAGC
((((((((((.(((((.....&.)))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022492
GeneSymbolTTC31
Binding site190,235
Score1.0
Seed1
Au0.353
Energy-23.6
Binding len19
Me-6.762
Phylopstem-0.2155948
Phylopflank0.88244102375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure