Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGCTGTACTGCAGACTGCAAT
(((((((((((((.....(((&))).....))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022495
GeneSymbolPCNX4
Binding site1722,1745
Score0.923
Seed1
Au0.471
Energy-21.0
Binding len23
Me-5.763
Phylopstem2.7340405
Phylopflank3.655488105
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure