Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACACGCCGCCGCTTGTGCTGCAGC
(((((((.((((((((.((((&)))))))....)))))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022551
GeneSymbolRPS18
Binding site16,44
Score0.846
Seed1
Au0.426
Energy-22.0
Binding len28
Me-6.251
Phylopstem1.5129645416666664
Phylopflank3.7644826499999984
Longest consecutive pairings7
Position of longest consecutive pairings21
Pairings in 3prime end7
Position5UTR
2D Structure