Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATGCAATTGCTGGGACAGCTGCAGG
(((((((((((((((((.(((&))).)))))))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022553
GeneSymbolVPS52
Binding site1794,1822
Score0.846
Seed1
Au0.471
Energy-24.1
Binding len28
Me-3.938
Phylopstem4.917132426086956
Phylopflank4.374977745000001
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure