Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGCGCCTCATTGCTGTAAT
(((((((((.(((..(((((.&)))))..))).))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022570
GeneSymbolCLEC7A
Binding site240,263
Score0.846
Seed1
Au0.515
Energy-18.7
Binding len23
Me-6.772
Phylopstem-0.23547917272727278
Phylopflank0.27872540125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure