Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGCACCGTGGCGACCGCGGCGCT
..((.(((((((((((..(((&.)))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022571
GeneSymbolGPR135
Binding site281,309
Score1.0
Seed0
Au0.265
Energy-26.1
Binding len21
Me-9.076
Phylopstem-0.2862412545454545
Phylopflank0.26394058499999995
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure