Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAGGCTACAGAGGATCAAATGCGGCTCCTACGGCTGCAGCGGCGC
.(((.(((((((((((.(((.&.)))))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022575
GeneSymbolVPS16
Binding site2028,2076
Score0.923
Seed0
Au0.368
Energy-25.1
Binding len20
Me-7.912
Phylopstem6.111545454545453
Phylopflank3.3790000000000004
Longest consecutive pairings14
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure