Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGCGGCAATGGCTGCAGA
(((((((((..(((((.((((&)))).)))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022580
GeneSymbolCSHL1
Binding site51,73
Score1.0
Seed1
Au0.426
Energy-22.5
Binding len22
Me-8.005
Phylopstem-0.009560155555555573
Phylopflank0.5998963024999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure