Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGCGGCAATGGCTGCAGG
(((((((((..(((((.((((&)))).)))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022645
GeneSymbolCSH2
Binding site104,126
Score0.923
Seed1
Au0.353
Energy-22.5
Binding len22
Me-8.005
Phylopstem1.9317635111111109
Phylopflank1.3136102822499995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure