Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACAGCAAGTTTGACACAAACTCACACAACCATGACGCACTGCT
..((((.(((((((((.((((&))))))))).............................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022645
GeneSymbolCSH2
Binding site331,378
Score0.846
Seed0
Au0.515
Energy-17.0
Binding len47
Me-6.501
Phylopstem2.332084471052633
Phylopflank1.5116838425
Longest consecutive pairings9
Position of longest consecutive pairings38
Pairings in 3prime end7
PositionCDS
2D Structure