Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCAGCAGCCCATGTGACAACAGGGTTCCAGCACAGCAGCTGTAT
.(((((((((((((((..(((&)))..)))))).........................))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022652
GeneSymbolDUSP6
Binding site1067,1113
Score0.923
Seed1
Au0.515
Energy-21.4
Binding len46
Me-3.793
Phylopstem3.5034390749999993
Phylopflank2.458608295
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure