Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGGGCTGGAGGGG
...((((.(((((..((((..&))))))))).)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_022658
GeneSymbolHOXC8
Binding site1222,1237
Score1.0
Seed0
Au0.471
Energy-24.4
Binding len15
Me-10.42
Phylopstem1.1039478
Phylopflank1.0899384324999999
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end4
Position3UTR
2D Structure