Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCTCTGAGCTGCAT
.(((((((.(((..(.(((((&))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022658
GeneSymbolHOXC8
Binding site1813,1832
Score0.821
Seed1
Au0.559
Energy-20.2
Binding len19
Me-7.229
Phylopstem0.9246214857142857
Phylopflank1.13783052625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure