Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAGTCCTGGAATGCAGCCCAGCACTGCC
..(((((((.((((((((((.&.)))....)))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022664
GeneSymbolECM1
Binding site523,555
Score0.846
Seed1
Au0.353
Energy-19.5
Binding len25
Me-6.2
Phylopstem0.2946238428571428
Phylopflank0.7243942237499998
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure