Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGCTGCT
..(((((((((((........&))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022717
GeneSymbolSNRNP35
Binding site26,39
Score0.846
Seed1
Au0.309
Energy-19.7
Binding len13
Me-6.782
Phylopstem-0.4094015833333333
Phylopflank0.008039420000000075
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure