Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCAAGCTGTTTGCTGTT
..(((((.(((((((((((((&)))))))..))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022719
GeneSymbolESS2
Binding site1635,1658
Score0.846
Seed0
Au0.5
Energy-21.4
Binding len23
Me-7.271
Phylopstem3.1250351066666666
Phylopflank1.8877178525
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end8
Position3UTR
2D Structure