Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACTTGCTTCTGTCTTGCCTCCTGTCTGCAGCTGTGAA
((((((((((((.....((((&.)))).....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022720
GeneSymbolDGCR8
Binding site4139,4178
Score0.923
Seed1
Au0.529
Energy-23.4
Binding len23
Me-7.052
Phylopstem1.2326003333333333
Phylopflank0.6148623599999999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure